2GHL	Transferase	date	Mar 27, 2006
title	Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibi 874743
authors	R.L.Walter, M.J.Mekel, A.G.Evdokimov, M.E.Pokross, T.A.Brugel
compound		source
Molecule: Mitogen-Activated Protein Kinase 14 Chain: A Synonym: Mitogen-Activated Protein Kinase P38 Alpha, Map Ki Alpha, Crk1; Ec: 2.7.1.37 Engineered: Yes Mutation: Yes		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090 Gene: Mapk14, Crk1, Csbp1, Csbp2 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 21 21 21	R_factor 0.199 R_Free 0.301
crystal cell	length a length b length c angle alpha angle beta angle gamma 65.261 74.426 76.938 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.10 Å
ligand	LIB BindingDB	enzyme	Transferase E.C.2.7.1.37 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Development of N-2,4-pyrimidine-N-phenyl-N'-phenyl ureas as inhibitors of tumor necrosis factor alpha (TNF-alpha) synthesis. Part 1., Brugel TA, Maier JA, Clark MP, Sabat M, Golebiowski A, Bookland RG, Laufersweiler MJ, Laughlin SK, Vanrens JC, De B, Hsieh LC, Mekel MJ, Janusz MJ, Bioorg Med Chem Lett. 2006 Jul 1;16(13):3510-3. Epub 2006 May 2. PMID:16632356

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (66 Kb) [Save to disk] Biological Unit Coordinates (2ghl.pdb1.gz) 61 Kb LPC: Ligand-Protein Contacts for 2GHL CSU: Contacts of Structural Units for 2GHL Likely Quarternary Molecular Structure file(s) for 2GHL Structure Factors (246 Kb) Retrieve 2GHL in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2GHL from S2C, [Save to disk] Re-refined 2ghl structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2GHL in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2GHL

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2GHL, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2ghl] [2ghl_A] SWISS-PROT database: [P47811] Domain organization of [MK14_MOUSE] by SWISSPFAM Domain found in 2GHL: [S_TKc ] by SMART

Other resources with information on 2GHL

Community annotation for 2GHL at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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