2GHR Crystal structure of homoserine o-succinyltransferase (NP_981826.1) from Bacillus cereus ATCC 10987 at 2.40 A resolution date
authors JCSG, Joint.Center.for.Structural.Genomics.
compound source
symmetry
R_factor
R_Free 0.25
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 2.40
ligand MSE, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of homoserine O-succinyltransferase from Bacillus cereus at 2.4 A resolution., Zubieta C, Krishna SS, McMullan D, Miller MD, Abdubek P, Agarwalla S, Ambing E, Astakhova T, Axelrod HL, Carlton D, Chiu HJ, Clayton T, Deller M, DiDonato M, Duan L, Elsliger MA, Grzechnik SK, Hale J, Hampton E, Han GW, Haugen J, Jaroszewski L, Jin KK, Klock HE, Knuth MW, Koesema E, Kumar A, Marciano D, Morse AT, Nigoghossian E, Oommachen S, Reyes R, Rife CL, van den Bedem H, Weekes D, White A, Xu Q, Hodgson KO, Wooley J, Deacon AM, Godzik A, Lesley SA, Wilson IA, Proteins. 2007 Sep 1;68(4):999-1005. PMID:17546672
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (54 Kb) [Save to disk]
  • Biological Unit Coordinates (2ghr.pdb1.gz) 91 Kb
  • LPC: Ligand-Protein Contacts for 2GHR
  • CSU: Contacts of Structural Units for 2GHR
  • Likely Quarternary Molecular Structure file(s) for 2GHR
  • Structure Factors (3084 Kb)
  • Retrieve 2GHR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2GHR from S2C, [Save to disk]
  • Re-refined 2ghr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2GHR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2GHR
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2GHR, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ghr_A] [2ghr]
  • SWISS-PROT database: [Q72X44]
  • Domain organization of [META_BACC1] by SWISSPFAM
  • Other resources with information on 2GHR
  • Community annotation for 2GHR at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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