2GQX Oxidoreductase date Apr 22, 2006
title Crystal Structure Of Cytochrome P450cam Mutant (F87wy96fl244av247lc334a) With Pentachlorobenzene
authors Z.Rao, L.L.Wong, F.Xu, S.G.Bell
compound source
Molecule: Cytochrome P450-Cam
Chain: A, B
Synonym: Camphor 5-Monooxygenase, P450cam
Ec: 1.14.15.1
Engineered: Yes
Mutation: Yes
Organism_scientific: Pseudomonas Putida
Organism_taxid: 303
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Jm109
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pchc
symmetry Space Group: P 1 21 1
R_factor 0.193 R_Free 0.236
crystal
cell
length a length b length c angle alpha angle beta angle gamma
67.033 62.037 95.004 90.00 89.64 90.00
method X-Ray Diffractionresolution 2.10 Å
ligand 5CL, HEM, K enzyme Oxidoreductase E.C.1.14.15.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructure-activity correlations in pentachlorobenzene oxidation by engineered cytochrome P450cam., Xu F, Bell SG, Rao Z, Wong LL, Protein Eng Des Sel. 2007 Oct;20(10):473-80. Epub 2007 Oct 24. PMID:17962225
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (144 Kb) [Save to disk]
  • Biological Unit Coordinates (2gqx.pdb1.gz) 71 Kb
  • Biological Unit Coordinates (2gqx.pdb2.gz) 70 Kb
  • LPC: Ligand-Protein Contacts for 2GQX
  • CSU: Contacts of Structural Units for 2GQX
  • Likely Quarternary Molecular Structure file(s) for 2GQX
  • Structure Factors (661 Kb)
  • Retrieve 2GQX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2GQX from S2C, [Save to disk]
  • Re-refined 2gqx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2GQX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2GQX
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2GQX, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2gqx_B] [2gqx_A] [2gqx]
  • SWISS-PROT database: [P00183]
  • Domain organization of [CPXA_PSEPU] by SWISSPFAM
  • Other resources with information on 2GQX
  • Community annotation for 2GQX at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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