2GR7 Membrane Protein date Apr 23, 2006
title Hia 992-1098
authors G.Meng, G.Waksman
compound source
Molecule: Adhesin
Chain: A, B, C, D, E, F
Fragment: Residues 1104-1204
Engineered: Yes
 Organism_scientific: Haemophilus Influenzae
Organism_taxid: 727
Strain: Strain 11
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(B834)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pask-Iba12
symmetry Space Group: C 1 2 1
R_factor 0.226 R_Free 0.252
crystal
cell
length a length b length c angle alpha angle beta angle gamma
97.340 56.296 158.706 90.00 90.04 90.00
method X-Ray Diffractionresolution 2.30 Å
ligand C8E enzyme
Primary referenceStructure of the outer membrane translocator domain of the Haemophilus influenzae Hia trimeric autotransporter., Meng G, Surana NK, St Geme JW, Waksman G, EMBO J. 2006 May 11;. PMID:16688217
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (95 Kb) [Save to disk]
  • Biological Unit Coordinates (2gr7.pdb1.gz) 45 Kb
  • Biological Unit Coordinates (2gr7.pdb2.gz) 45 Kb
  • LPC: Ligand-Protein Contacts for 2GR7
  • CSU: Contacts of Structural Units for 2GR7
  • Likely Quarternary Molecular Structure file(s) for 2GR7
  • Structure Factors (298 Kb)
  • Retrieve 2GR7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2GR7 from S2C, [Save to disk]
  • Re-refined 2gr7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2GR7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2GR7
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2GR7, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2gr7_C] [2gr7_E] [2gr7_A] [2gr7] [2gr7_D] [2gr7_B] [2gr7_F]
  • SWISS-PROT database: [Q48152]
  • Domain organization of [Q48152_HAEIN] by SWISSPFAM
    • Other resources with information on 2GR7
  • Community annotation for 2GR7 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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