2GVR Crystal structure of the berenil-D(CGCGAATTCGCG)2 complex at 1.65 A resolution. date
authors Lee, M.P.H., Parkinson, G.N., Neidle, S.
compound source
symmetry
R_factor
R_Free 0.284
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.65
ligand BRN, MG enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (15 Kb) [Save to disk]
  • Biological Unit Coordinates (2gvr.pdb1.gz) 12 Kb
  • LPC: Ligand-Protein Contacts for 2GVR
  • CSU: Contacts of Structural Units for 2GVR
  • Likely Quarternary Molecular Structure file(s) for 2GVR
  • Structure Factors (81 Kb)
  • Retrieve 2GVR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2GVR from S2C, [Save to disk]
  • Re-refined 2gvr structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2GVR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2GVR
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2GVR, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2gvr_B] [2gvr] [2gvr_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 2GVR
  • Community annotation for 2GVR at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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