2H00 Transferase date May 12, 2006
title Human Methyltransferase 10 Domain Containing Protein
authors J.R.Min, H.Wu, H.Zeng, P.Loppnau, J.Weigelt, M.Sundstrom, C.H.Arro A.M.Edwards, A.Bochkarev, A.N.Plotnikov, Structural Genomics C (Sgc)
compound source
Molecule: Methyltransferase 10 Domain Containing Protein
Chain: A, B, C
Fragment: Residues 40-291
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21 (De3) Codon Plus Ril
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P28a-Lic
symmetry Space Group: P 31 2 1
R_factor 0.221 R_Free 0.274
crystal
cell
length a length b length c angle alpha angle beta angle gamma
133.737 133.737 78.833 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.00 Å
ligand CL, DTU, SAH enzyme
note 2H00 is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (113 Kb) [Save to disk]
  • Biological Unit Coordinates (2h00.pdb1.gz) 40 Kb
  • Biological Unit Coordinates (2h00.pdb2.gz) 36 Kb
  • Biological Unit Coordinates (2h00.pdb3.gz) 35 Kb
  • LPC: Ligand-Protein Contacts for 2H00
  • CSU: Contacts of Structural Units for 2H00
  • Likely Quarternary Molecular Structure file(s) for 2H00
  • Structure Factors (408 Kb)
  • Retrieve 2H00 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2H00 from S2C, [Save to disk]
  • Re-refined 2h00 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2H00 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2H00
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2H00, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2h00] [2h00_A] [2h00_C] [2h00_B]
  • SWISS-PROT database: [Q86W50]
  • Domain organization of [MET10_HUMAN] by SWISSPFAM
  • Other resources with information on 2H00
  • Community annotation for 2H00 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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