2H6L Structural Genomics, Unknown Function date May 31, 2006
title X-Ray Crystal Structure Of The Metal-Containing Protein Af0104 From Archaeoglobus Fulgidus. Northeast Structural Genomics Consortium Target Gr103.
authors A.P.Kuzin, M.Abashidze, Y.Fang, C.Chen, K.Cunningham, K.Conover, L.C.Ma, R.Xiao, T.B.Acton, G.T.Montelione, L.Tong, J.F.Hunt, Northeast Structural Genomics Consortium (Nesg)
compound source
Molecule: Hypothetical Protein
Chain: A, B, C
Engineered: Yes
 Organism_scientific: Archaeoglobus Fulgidus
Organism_taxid: 2234
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)+ Magic
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet21
symmetry Space Group: P 1
R_factor 0.187 R_Free 0.237
crystal
cell
length a length b length c angle alpha angle beta angle gamma
47.673 47.714 47.665 70.75 70.81 70.83
method X-Ray Diffractionresolution 2.00 Å
ligand ACY, MSE, ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (77 Kb) [Save to disk]
  • Biological Unit Coordinates (2h6l.pdb1.gz) 73 Kb
  • LPC: Ligand-Protein Contacts for 2H6L
  • CSU: Contacts of Structural Units for 2H6L
  • Likely Quarternary Molecular Structure file(s) for 2H6L
  • Structure Factors (626 Kb)
  • Retrieve 2H6L in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2H6L from S2C, [Save to disk]
  • Re-refined 2h6l structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2H6L in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2H6L
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2H6L, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2h6l_C] [2h6l_A] [2h6l] [2h6l_B]
  • SWISS-PROT database: [O30132]
  • Domain organization of [O30132_ARCFU] by SWISSPFAM
    • Other resources with information on 2H6L
  • Community annotation for 2H6L at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
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  • Images from IMB Jena Image Library of Biological Macromolecules.

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