2H85	Viral Protein	date	Jun 06, 2006
title	Crystal Structure Of Nsp 15 From Sars
authors	S.Ricagno, M.P.Egloff, R.Ulferts, B.Coutard, D.Nurizzo, V.Campana C.Cambillau, J.Ziebuhr, B.Canard
compound		source
Molecule: Putative Orf1ab Polyprotein Chain: A Engineered: Yes Mutation: Yes		Organism_scientific: Sars Coronavirus Organism_taxid: 227859 Strain: Frankfurt-1 Gene: Nsp15 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: C41 (De3) Expression_system_vector_type: Gateway
symmetry	Space Group: P 43 3 2	R_factor 0.208 R_Free 0.240
crystal cell	length a length b length c angle alpha angle beta angle gamma 166.584 166.584 166.584 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.60 Å
Primary reference	Crystal structure and mechanistic determinants of SARS coronavirus nonstructural protein 15 define an endoribonuclease family., Ricagno S, Egloff MP, Ulferts R, Coutard B, Nurizzo D, Campanacci V, Cambillau C, Ziebuhr J, Canard B, Proc Natl Acad Sci U S A. 2006 Aug 8;103(32):11892-11897. Epub 2006 Aug 1. PMID:16882730

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (60 Kb) [Save to disk] Biological Unit Coordinates (2h85.pdb1.gz) 323 Kb CSU: Contacts of Structural Units for 2H85 Likely Quarternary Molecular Structure file(s) for 2H85 Structure Factors (367 Kb) Retrieve 2H85 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2H85 from S2C, [Save to disk] Re-refined 2h85 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2H85 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2H85

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2H85, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2h85_A] [2h85] SWISS-PROT database: [P0C6X7] Domain organization of [R1AB_CVHSA] by SWISSPFAM

Other resources with information on 2H85

Community annotation for 2H85 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---