2H8H	Transferase	date	Jun 07, 2006
title	Src Kinase In Complex With A Quinazoline Inhibitor
authors	L.R.Otterbein, R.Norman, R.A.Pauptit, S.Rowsell, J.Breed
compound		source
Molecule: Proto-Oncogene Tyrosine-Protein Kinase Src Chain: A Synonym: P60-Src, C- Src, Pp60c-Src Ec: 2.7.10.2 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Src, Src1 Expression_system: Spodoptera Frugiperda Expression_system_common: Fall Armyworm Expression_system_taxid: 7108 Expression_system_cell_line: Sf9 Cells Expression_system_vector: Baculovirus
symmetry	Space Group: P 21 21 21	R_factor 0.204 R_Free 0.272
crystal cell	length a length b length c angle alpha angle beta angle gamma 49.806 72.467 171.566 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.20 Å
ligand	H8H, PTR BindingDB	enzyme	Transferase E.C.2.7.10.2 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	N-(5-chloro-1,3-benzodioxol-4-yl)-7-[2-(4-methylpiperazin-1-yl)ethoxy]-5- (tetrahydro-2H-pyran-4-yloxy)quinazolin-4-amine, a novel, highly selective, orally available, dual-specific c-Src/Abl kinase inhibitor., Hennequin LF, Allen J, Breed J, Curwen J, Fennell M, Green TP, Lambert-van der Brempt C, Morgentin R, Norman RA, Olivier A, Otterbein L, Ple PA, Warin N, Costello G, J Med Chem. 2006 Nov 2;49(22):6465-88. PMID:17064066

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (83 Kb) [Save to disk] Biological Unit Coordinates (2h8h.pdb1.gz) 77 Kb LPC: Ligand-Protein Contacts for 2H8H CSU: Contacts of Structural Units for 2H8H Likely Quarternary Molecular Structure file(s) for 2H8H Structure Factors (475 Kb) Retrieve 2H8H in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2H8H from S2C, [Save to disk] Re-refined 2h8h structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2H8H in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2H8H

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2H8H, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2h8h] [2h8h_A] SWISS-PROT database: [P12931] Domain organization of [SRC_HUMAN] by SWISSPFAM Domains found in 2H8H: [SH2] [SH3] [TyrKc ] by SMART

Other resources with information on 2H8H

Community annotation for 2H8H at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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