2HAG	Crystal structure of a putative dyp-type peroxidase protein (so_0740) from shewanella oneidensis at 2.75 A resolution	date
authors	JCSG, Joint.Center.for.Structural.Genomics.
compound		source
symmetry		R_factor R_Free 0.229
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	2.75
ligand	MSE	enzyme
Gene	NP
Gene Ontology	Chain Function Process Component A peroxidase activity
Primary reference	Crystal structures of two novel dye-decolorizing peroxidases reveal a beta-barrel fold with a conserved heme-binding motif., Zubieta C, Krishna SS, Kapoor M, Kozbial P, McMullan D, Axelrod HL, Miller MD, Abdubek P, Ambing E, Astakhova T, Carlton D, Chiu HJ, Clayton T, Deller MC, Duan L, Elsliger MA, Feuerhelm J, Grzechnik SK, Hale J, Hampton E, Han GW, Jaroszewski L, Jin KK, Klock HE, Knuth MW, Kumar A, Marciano D, Morse AT, Nigoghossian E, Okach L, Oommachen S, Reyes R, Rife CL, Schimmel P, van den Bedem H, Weekes D, White A, Xu Q, Hodgson KO, Wooley J, Deacon AM, Godzik A, Lesley SA, Wilson IA, Proteins. 2007 Nov 1;69(2):223-33. PMID:17654545

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (57 Kb) [Save to disk] Biological Unit Coordinates (2hag.pdb1.gz) 99 Kb LPC: Ligand-Protein Contacts for 2HAG CSU: Contacts of Structural Units for 2HAG Likely Quarternary Molecular Structure file(s) for 2HAG Structure Factors (3500 Kb) Retrieve 2HAG in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2HAG from S2C, [Save to disk] Re-refined 2hag structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2HAG in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2HAG

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2HAG, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2hag] [2hag_A] SWISS-PROT database: [Q8EIU4] Domain organization of [Q8EIU4_SHEON] by SWISSPFAM

Other resources with information on 2HAG

Community annotation for 2HAG at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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