2HAQ	Isomerase	date	Jun 13, 2006
title	Crystal Structure Of Cyclophilin A From Leishmania Donovani
authors	V.Venugopal, B.Sen, A.K.Datta, R.Banerjee
compound		source
Molecule: Cyclophilin Chain: A Ec: 5.2.1.8 Engineered: Yes		Organism_scientific: Leishmania Donovani Organism_taxid: 5661 Gene: Cyp Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_strain: M15 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pqe32
symmetry	Space Group: P 43 21 2	R_factor 0.178 R_Free 0.197
crystal cell	length a length b length c angle alpha angle beta angle gamma 48.590 48.590 141.190 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.97 Å
ligand		enzyme	Isomerase E.C.5.2.1.8 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Structure of cyclophilin from Leishmania donovani at 1.97 A resolution., Venugopal V, Sen B, Datta AK, Banerjee R, Acta Crystallograph Sect F Struct Biol Cryst Commun. 2007 Feb 1;63(Pt, 2):60-4. Epub 2007 Jan 17. PMID:17277440

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (32 Kb) [Save to disk] Biological Unit Coordinates (2haq.pdb1.gz) 28 Kb CSU: Contacts of Structural Units for 2HAQ Likely Quarternary Molecular Structure file(s) for 2HAQ Structure Factors (103 Kb) Retrieve 2HAQ in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2HAQ from S2C, [Save to disk] Re-refined 2haq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2HAQ in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2HAQ

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2HAQ, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2haq_A] [2haq] SWISS-PROT database: [Q9U9R3] Domain organization of [Q9U9R3_LEIDO] by SWISSPFAM

Other resources with information on 2HAQ

Community annotation for 2HAQ at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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