2HEN	Transferase	date	Jun 21, 2006
title	Crystal Structure Of The Ephb2 Receptor Kinase Domain In Com Adp
authors	L.E.Wybenga-Groot, F.Sicheri, T.Pawson
compound		source
Molecule: Ephrin Type-B Receptor 2 Chain: A, B, C, D Fragment: Kinase Domain (Residues 622-906) Synonym: Tyrosine-Protein Kinase Receptor Eph-3, Neural Kin Receptor Tyrosine Kinase, Sek-3; Ec: 2.7.10.1 Engineered: Yes Mutation: Yes		Organism_scientific: Mus Musculus Organism_common: House Mouse Organism_taxid: 10090 Gene: Ephb2, Epth3, Nuk, Sek3 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 1 21 1	R_factor 0.205 R_Free 0.260
crystal cell	length a length b length c angle alpha angle beta angle gamma 60.798 98.304 114.168 90.00 90.18 90.00
method	X-Ray Diffraction	resolution	2.60 Å
ligand	ADP, MG	enzyme	Transferase E.C.2.7.10.1 BRENDA
Gene Ontology	Chain Function Process Component A, D, C, B
Primary reference	A change in conformational dynamics underlies the activation of Eph receptor tyrosine kinases., Wiesner S, Wybenga-Groot LE, Warner N, Lin H, Pawson T, Forman-Kay JD, Sicheri F, EMBO J. 2006 Oct 4;25(19):4686-96. Epub 2006 Sep 14. PMID:16977320

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (176 Kb) [Save to disk] Biological Unit Coordinates (2hen.pdb1.gz) 46 Kb Biological Unit Coordinates (2hen.pdb2.gz) 45 Kb Biological Unit Coordinates (2hen.pdb3.gz) 45 Kb Biological Unit Coordinates (2hen.pdb4.gz) 44 Kb LPC: Ligand-Protein Contacts for 2HEN CSU: Contacts of Structural Units for 2HEN Likely Quarternary Molecular Structure file(s) for 2HEN Structure Factors (573 Kb) Retrieve 2HEN in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2HEN from S2C, [Save to disk] Re-refined 2hen structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2HEN in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2HEN

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2HEN, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2hen_B] [2hen_D] [2hen] [2hen_A] [2hen_C] SWISS-PROT database: [P54763] Domain organization of [EPHB2_MOUSE] by SWISSPFAM Domain found in 2HEN: [TyrKc ] by SMART

Other resources with information on 2HEN

Community annotation for 2HEN at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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