2HEX Blood Clotting date Aug 01, 1998
title Decamers Observed In The Crystals Of Bovine Pancreatic Tryps Inhibitor
authors J.Lubkowski, A.Wlodawer
compound source
Molecule: Protein (Pancreatic Trypsin Inhibitor)
Chain: A, B, C, D, E
 Organism_scientific: Bos Taurus
Organism_common: Cattle
Organism_taxid: 9913
Organ: Pancreas
symmetry Space Group: P 64 2 2
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
94.995 94.995 158.103 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.10 Å
ligand SO4 enzyme
related structures by homologous chain: 1BZX, 2TPI
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, E, B


Primary referenceDecamers observed in the crystals of bovine pancreatic trypsin inhibitor., Lubkowski J, Wlodawer A, Acta Crystallogr D Biol Crystallogr 1999 Jan;55 ( Pt 1):335-7. PMID:10089443
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (55 Kb) [Save to disk]
  • Biological Unit Coordinates (2hex.pdb1.gz) 50 Kb
  • Biological Unit Coordinates (2hex.pdb2.gz) 98 Kb
  • LPC: Ligand-Protein Contacts for 2HEX
  • CSU: Contacts of Structural Units for 2HEX
  • Likely Quarternary Molecular Structure file(s) for 2HEX
  • Structure Factors (198 Kb)
  • Retrieve 2HEX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2HEX from S2C, [Save to disk]
  • Re-refined 2hex structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2HEX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2HEX
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2HEX, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d2hexa_, region A [Jmol] [rasmolscript] [script source]
        - Domain d2hexb_, region B [Jmol] [rasmolscript] [script source]
        - Domain d2hexc_, region C [Jmol] [rasmolscript] [script source]
        - Domain d2hexd_, region D [Jmol] [rasmolscript] [script source]
        - Domain d2hexe_, region E [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2hex_C] [2hex_D] [2hex_A] [2hex_E] [2hex_B] [2hex]
  • SWISS-PROT database: [P00974]
  • Domain organization of [BPT1_BOVIN] by SWISSPFAM
  • Domain found in 2HEX: [KU ] by SMART
    • Other resources with information on 2HEX
  • Community annotation for 2HEX at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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