2HIJ Blood Clotting Hydrolase Inhibitor date Jun 29, 2006
title Crystal Structure Of P14 Alanine Variant Of Antithrombin
authors S.A.Luis, S.C.Bock, J.A.Huntington
compound source
Molecule: Antithrombin-III
Chain: I
Synonym: Atiii
Engineered: Yes
Mutation: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Serpinc1, At3
Expression_system: Drosophila Melanogaster
Expression_system_common: Fruit Fly
Expression_system_taxid: 7227

Molecule: Antithrombin-III
Chain: L
Synonym: Atiii

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Other_details: Alpha Glycoform, Plasma Alpha Antithrombin W Converted To Latent By The Glycerol Method
symmetry Space Group: P 1 21 1
R_factor 0.199 R_Free 0.249
crystal
cell
length a length b length c angle alpha angle beta angle gamma
61.743 98.627 87.569 90.00 101.40 90.00
method X-Ray Diffractionresolution 2.90 Å
ligand GOL, MAN, NAG enzyme
Gene
Ontology
ChainFunctionProcessComponent
I


L


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (133 Kb) [Save to disk]
  • Biological Unit Coordinates (2hij.pdb1.gz) 65 Kb
  • Biological Unit Coordinates (2hij.pdb2.gz) 64 Kb
  • LPC: Ligand-Protein Contacts for 2HIJ
  • CSU: Contacts of Structural Units for 2HIJ
  • Likely Quarternary Molecular Structure file(s) for 2HIJ
  • Structure Factors (169 Kb)
  • Retrieve 2HIJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2HIJ from S2C, [Save to disk]
  • Re-refined 2hij structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2HIJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2HIJ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2HIJ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2hij_I] [2hij_L] [2hij]
  • SWISS-PROT database: [P01008]
  • Domain organization of [ANT3_HUMAN] by SWISSPFAM
  • Domain found in 2HIJ: [SERPIN ] by SMART
  • Other resources with information on 2HIJ
  • Community annotation for 2HIJ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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