2HOG Transferase date Jul 14, 2006
title Crystal Structure Of Chek1 In Complex With Inhibitor 20
authors Y.Yan, M.Ikuta
compound source
Molecule: Serinethreonine-Protein Kinase Chk1
Chain: A
Fragment: Kinase Domain, Residues 2-307
Ec: 2.7.11.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Chek1, Chk1
Expression_system: Spodoptera Frugiperda
Expression_system_common: Fall Armyworm
Expression_system_taxid: 7108
Expression_system_vector_type: Baculovirus
Expression_system_plasmid: Prad2030
symmetry Space Group: P 1 21 1
R_factor 0.204 R_Free 0.236
crystal
cell
length a length b length c angle alpha angle beta angle gamma
44.970 65.530 58.400 90.00 94.20 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand 710 BindingDB enzyme Transferase E.C.2.7.11.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary reference3-(Indol-2-yl)indazoles as Chek1 kinase inhibitors: Optimization of potency and selectivity via substitution at C6., Fraley ME, Steen JT, Brnardic EJ, Arrington KL, Spencer KL, Hanney BA, Kim Y, Hartman GD, Stirdivant SM, Drakas BA, Rickert K, Walsh ES, Hamilton K, Buser CA, Hardwick J, Tao W, Beck SC, Mao X, Lobell RB, Sepp-Lorenzino L, Yan Y, Ikuta M, Munshi SK, Kuo LC, Kreatsoulas C, Bioorg Med Chem Lett. 2006 Dec 1;16(23):6049-53. Epub 2006 Sep 15. PMID:16978863
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (54 Kb) [Save to disk]
  • Biological Unit Coordinates (2hog.pdb1.gz) 50 Kb
  • LPC: Ligand-Protein Contacts for 2HOG
  • CSU: Contacts of Structural Units for 2HOG
  • Likely Quarternary Molecular Structure file(s) for 2HOG
  • Retrieve 2HOG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2HOG from S2C, [Save to disk]
  • View 2HOG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2HOG
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2HOG, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2hog] [2hog_A]
  • SWISS-PROT database: [O14757]
  • Domain organization of [CHK1_HUMAN] by SWISSPFAM
  • Domain found in 2HOG: [S_TKc ] by SMART
  • Other resources with information on 2HOG
  • Community annotation for 2HOG at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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