2HSA Oxidoreductase date Jul 21, 2006
title Crystal Structure Of 12-Oxophytodienoate Reductase 3 (Opr3) Tomato
authors C.Breithaupt, T.Clausen, R.Huber
compound source
Molecule: 12-Oxophytodienoate Reductase 3
Chain: B, A
Synonym: 12-Oxophytodienoate-10,11-Reductase 3, Opda-Reduct Leopr3;
Ec: 1.3.1.42
Engineered: Yes
Organism_scientific: Solanum Lycopersicum
Organism_taxid: 4081
Gene: Opr3
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.225 R_Free 0.255
crystal
cell
length a length b length c angle alpha angle beta angle gamma
57.904 89.677 81.378 90.00 109.46 90.00
method X-Ray Diffractionresolution 1.50 Å
ligand CL, FMN, SO4 enzyme Oxidoreductase E.C.1.3.1.42 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceCrystal structure of 12-oxophytodienoate reductase 3 from tomato: Self-inhibition by dimerization., Breithaupt C, Kurzbauer R, Lilie H, Schaller A, Strassner J, Huber R, Macheroux P, Clausen T, Proc Natl Acad Sci U S A. 2006 Sep 26;103(39):14337-42. Epub 2006 Sep 18. PMID:16983071
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (131 Kb) [Save to disk]
  • Biological Unit Coordinates (2hsa.pdb1.gz) 126 Kb
  • LPC: Ligand-Protein Contacts for 2HSA
  • CSU: Contacts of Structural Units for 2HSA
  • Likely Quarternary Molecular Structure file(s) for 2HSA
  • Structure Factors (990 Kb)
  • Retrieve 2HSA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2HSA from S2C, [Save to disk]
  • Re-refined 2hsa structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2HSA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2HSA
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2HSA, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2hsa] [2hsa_A] [2hsa_B]
  • SWISS-PROT database: [Q9FEW9]
  • Domain organization of [OPR3_SOLLC] by SWISSPFAM
  • Other resources with information on 2HSA
  • Community annotation for 2HSA at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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