2HSG Transcription Regulator date Jul 21, 2006
title Structure Of Transcription Regulator Ccpa In Its Dna-Free St
authors B.Loll, C.Alings, W.Saenger, J.Biesiadka
compound source
Molecule: Glucose-Resistance Amylase Regulator
Chain: A
Synonym: Catabolite Control Protein
Engineered: Yes
Organism_scientific: Bacillus Megaterium
Organism_taxid: 1404
Gene: Ccpa
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pqe
symmetry Space Group: P 61 2 2
R_factor 0.271 R_Free 0.337
crystal
cell
length a length b length c angle alpha angle beta angle gamma
74.464 74.464 238.923 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.50 Å
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure of full-length transcription regulator CcpA in the apo form., Loll B, Saenger W, Biesiadka J, Biochim Biophys Acta. 2007 Apr 18;. PMID:17500051
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (55 Kb) [Save to disk]
  • Biological Unit Coordinates (2hsg.pdb1.gz) 50 Kb
  • CSU: Contacts of Structural Units for 2HSG
  • Likely Quarternary Molecular Structure file(s) for 2HSG
  • Structure Factors (102 Kb)
  • Retrieve 2HSG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2HSG from S2C, [Save to disk]
  • Re-refined 2hsg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2HSG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2HSG
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2HSG, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2hsg_A] [2hsg]
  • SWISS-PROT database: [P46828]
  • Domain organization of [CCPA_BACME] by SWISSPFAM
  • Domain found in 2HSG: [HTH_LACI ] by SMART
  • Other resources with information on 2HSG
  • Community annotation for 2HSG at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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