2I6O Hydrolase date Aug 29, 2006
title Crystal Structure Of The Complex Of The Archaeal Sulfolobus Phosphatase With Phosphopeptides N-G-(P)Y-K-N
authors H.M.Chu, A.H.J.Wang
compound source
Molecule: Sulfolobus Solfataricus Protein Tyrosine Phosphat
Chain: A
Synonym: Ssoptp
Ec: 3.1.3.48
Engineered: Yes
Mutation: Yes
Organism_scientific: Sulfolobus Solfataricus
Organism_taxid: 2287
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet21

Molecule: Nk(Ptr)Gn
Chain: B
Engineered: Yes

Synthetic: Yes
Other_details: Synthetic Peptide
symmetry Space Group: P 21 21 2
R_factor 0.191 R_Free 0.227
crystal
cell
length a length b length c angle alpha angle beta angle gamma
80.979 58.399 36.435 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand CA, IMD, PG4, PTR enzyme Hydrolase E.C.3.1.3.48 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A
  • protein tyrosine phosphatase...


  • Primary referenceEnzyme-substrate interactions revealed by the crystal structures of the archaeal Sulfolobus PTP-fold phosphatase and its phosphopeptide complexes., Chu HM, Wang AH, Proteins. 2006 Dec 15;66(4):996-1003. PMID:17173287
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (34 Kb) [Save to disk]
  • Biological Unit Coordinates (2i6o.pdb1.gz) 30 Kb
  • LPC: Ligand-Protein Contacts for 2I6O
  • CSU: Contacts of Structural Units for 2I6O
  • Likely Quarternary Molecular Structure file(s) for 2I6O
  • Structure Factors (184 Kb)
  • Retrieve 2I6O in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2I6O from S2C, [Save to disk]
  • Re-refined 2i6o structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2I6O in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2I6O
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2I6O, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2i6o] [2i6o_B] [2i6o_A]
  • SWISS-PROT database: [Q97VZ7]
  • Domain organization of [Q97VZ7_SULSO] by SWISSPFAM
  • Domain found in 2I6O: [PTPc_DSPc ] by SMART
  • Other resources with information on 2I6O
  • Community annotation for 2I6O at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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