2IEJ Transferase date Sep 19, 2006
title Human Protein Farnesyltransferase Complexed With Inhibitor C Stn-48 And Fpp Analog At 1.8a Resolution
authors M.A.Hast, L.S.Beese
compound source
Molecule: Protein Farnesyltransferasegeranylgeranyltransfe I Alpha Subunit;
Chain: A
Synonym: Caax Farnesyltransferase Alpha Subunit, Ras Protei Prenyltransferase Alpha, Ftase-Alpha, Type I Protein Gerany Geranyltransferase Alpha Subunit, Ggtase-I-Alpha;
Ec: 2.5.1.58, 2.5.1.59
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Fnta
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21-De3
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pak-41

Molecule: Protein Farnesyltransferase Subunit Beta
Chain: B
Synonym: Caax Farnesyltransferase Subunit Beta, Ras Protein Prenyltransferase Beta, Ftase-Beta;
Ec: 2.5.1.58
Engineered: Yes

Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Fntb
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21-De3
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pak-41
symmetry Space Group: P 61
R_factor 0.163 R_Free 0.188
crystal
cell
length a length b length c angle alpha angle beta angle gamma
178.253 178.253 64.661 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.80 Å
ligand ACT, FII, FRU, GLC, S48, ZN enzyme Transferase E.C.2.5.1.58 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A
  • acetylcholine receptor regul...
  • skeletal muscle acetylcholin...

  • B


    Primary referenceResistance mutations at the lipid substrate binding site of Plasmodium falciparum protein farnesyltransferase., Eastman RT, White J, Hucke O, Yokoyama K, Verlinde CL, Hast MA, Beese LS, Gelb MH, Rathod PK, Van Voorhis WC, Mol Biochem Parasitol. 2007 Mar;152(1):66-71. Epub 2006 Dec 22. PMID:17208314
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (139 Kb) [Save to disk]
  • Biological Unit Coordinates (2iej.pdb1.gz) 133 Kb
  • LPC: Ligand-Protein Contacts for 2IEJ
  • CSU: Contacts of Structural Units for 2IEJ
  • Likely Quarternary Molecular Structure file(s) for 2IEJ
  • Structure Factors (842 Kb)
  • Retrieve 2IEJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2IEJ from S2C, [Save to disk]
  • Re-refined 2iej structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2IEJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2IEJ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2IEJ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2iej] [2iej_A] [2iej_B]
  • SWISS-PROT database: [P49354] [P49356]
  • Domain organization of [FNTA_HUMAN] [FNTB_HUMAN] by SWISSPFAM
  • Other resources with information on 2IEJ
  • Community annotation for 2IEJ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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