2IGX Hydrolase date Sep 25, 2006
title Achiral, Cheap And Potent Inhibitors Of Plasmepsins II
authors L.Prade
compound source
Molecule: Plasmepsin-2
Chain: A
Synonym: Aspartic Hemoglobinase II, Pfapd
Ec: 3.4.23.39
Organism_scientific: Plasmodium Falciparum
Organism_common: Malaria Parasite P. Falciparum
Organism_taxid: 5833
symmetry Space Group: P 21 21 2
R_factor 0.200 R_Free 0.237
crystal
cell
length a length b length c angle alpha angle beta angle gamma
67.476 154.743 39.257 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.70 Å
ligand A1T enzyme Hydrolase E.C.3.4.23.39 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceAchiral, Cheap, and Potent Inhibitors of Plasmepsins I, II, and IV., Boss C, Corminboeuf O, Grisostomi C, Meyer S, Jones AF, Prade L, Binkert C, Fischli W, Weller T, Bur D, ChemMedChem. 2006 Nov 8;. PMID:17091526
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (68 Kb) [Save to disk]
  • Biological Unit Coordinates (2igx.pdb1.gz) 63 Kb
  • Biological Unit Coordinates (2igx.pdb2.gz) 124 Kb
  • LPC: Ligand-Protein Contacts for 2IGX
  • CSU: Contacts of Structural Units for 2IGX
  • Likely Quarternary Molecular Structure file(s) for 2IGX
  • Structure Factors (672 Kb)
  • Retrieve 2IGX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2IGX from S2C, [Save to disk]
  • Re-refined 2igx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2IGX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2IGX
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2IGX, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2igx_A] [2igx]
  • SWISS-PROT database: [P46925]
  • Domain organization of [PLM2_PLAFA] by SWISSPFAM
  • Other resources with information on 2IGX
  • Community annotation for 2IGX at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science