2IHQ Hormone Growth Factor date Sep 27, 2006
title Crystal Structure Of The Rat Androgen Receptor Ligand Bindin Complex With An N-Aryl-Hydroxybicyclohydantoin
authors J.S.Sack
compound source
Molecule: Androgen Receptor
Chain: A
Fragment: Ligand-Binding Domain
Synonym: Dihydrotestosterone Receptor
Engineered: Yes
Organism_scientific: Rattus Norvegicus
Organism_common: Norway Rat
Organism_taxid: 10116
Gene: Ar
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21-De3
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28b
symmetry Space Group: P 21 21 21
R_factor 0.206 R_Free 0.269
crystal
cell
length a length b length c angle alpha angle beta angle gamma
54.546 65.522 70.013 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand LG7 BindingDB enzyme
Primary referenceDiscovery of potent, orally-active, and muscle-selective androgen receptor modulators based on an N-aryl-hydroxybicyclohydantoin scaffold., Sun C, Robl JA, Wang TC, Huang Y, Kuhns JE, Lupisella JA, Beehler BC, Golla R, Sleph PG, Seethala R, Fura A, Krystek SR Jr, An Y, Malley MF, Sack JS, Salvati ME, Grover GJ, Ostrowski J, Hamann LG, J Med Chem. 2006 Dec 28;49(26):7596-9. PMID:17181141
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (47 Kb) [Save to disk]
  • Biological Unit Coordinates (2ihq.pdb1.gz) 42 Kb
  • LPC: Ligand-Protein Contacts for 2IHQ
  • CSU: Contacts of Structural Units for 2IHQ
  • Likely Quarternary Molecular Structure file(s) for 2IHQ
  • Structure Factors (145 Kb)
  • Retrieve 2IHQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2IHQ from S2C, [Save to disk]
  • Re-refined 2ihq structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2IHQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2IHQ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2IHQ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ihq_A] [2ihq]
  • SWISS-PROT database: [P15207]
  • Domain organization of [ANDR_RAT] by SWISSPFAM
  • Domain found in 2IHQ: [HOLI ] by SMART
  • Other resources with information on 2IHQ
  • Community annotation for 2IHQ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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