2IHY Hydrolase date Sep 27, 2006
title Structure Of The Staphylococcus Aureus Putative Atpase Subun Atp-Binding Cassette (Abc) Transporter
authors T.E.Mcgrath, C.S.Yu, V.Romanov, R.Lam, A.Dharamsi, C.Virag, K.Mans D.Thambipillai, D.Richards, J.Guthrie, A.M.Edwards, E.F.Pai, N.Y.Chirgadze
compound source
Molecule: Abc Transporter, Atp-Binding Protein
Chain: A, B
Ec: 3.6.3.34
Engineered: Yes
 Organism_scientific: Staphylococcus Aureus
Organism_taxid: 1280
Strain: Cola
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet15b
symmetry Space Group: P 1 21 1
R_factor 0.191 R_Free 0.231
crystal
cell
length a length b length c angle alpha angle beta angle gamma
51.972 74.832 68.818 90.00 102.21 90.00
method X-Ray Diffractionresolution 1.90 Å
ligand MSE, SO4 enzyme Hydrolase E.C.3.6.3.34 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (94 Kb) [Save to disk]
  • Biological Unit Coordinates (2ihy.pdb1.gz) 88 Kb
  • LPC: Ligand-Protein Contacts for 2IHY
  • CSU: Contacts of Structural Units for 2IHY
  • Likely Quarternary Molecular Structure file(s) for 2IHY
  • Structure Factors (720 Kb)
  • Retrieve 2IHY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2IHY from S2C, [Save to disk]
  • Re-refined 2ihy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2IHY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2IHY
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2IHY, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ihy_B] [2ihy_A] [2ihy]
  • SWISS-PROT database: [Q5HE50]
  • Domain organization of [Q5HE50_STAAC] by SWISSPFAM
  • Domain found in 2IHY: [AAA ] by SMART
    • Other resources with information on 2IHY
  • Community annotation for 2IHY at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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