2IID Oxidoreductase date Sep 27, 2006
title Structure Of L-Amino Acid Oxidase From Calloselasma Rhodosto Complex With L-Phenylalanine
authors I.M.Moustafa, S.Foster, A.Y.Lyubimov, A.Vrielink
compound source
Molecule: L-Amino-Acid Oxidase
Chain: A, B, C, D
Synonym: Lao, Laao, Apoxin I
Ec: 1.4.3.2
Organism_scientific: Calloselasma Rhodostoma
Organism_common: Malayan Pit Viper
Organism_taxid: 8717
Secretion: Venom
symmetry Space Group: P 1 21 1
R_factor 0.172 R_Free 0.210
crystal
cell
length a length b length c angle alpha angle beta angle gamma
78.760 154.003 103.183 90.00 109.52 90.00
method X-Ray Diffractionresolution 1.80 Å
ligand FAD, FUC, NAG, PHE enzyme Oxidoreductase E.C.1.4.3.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B
  • toxin activity


  • Primary referenceCrystal Structure of LAAO from Calloselasma rhodostoma with an l-Phenylalanine Substrate: Insights into Structure and Mechanism., Moustafa IM, Foster S, Lyubimov AY, Vrielink A, J Mol Biol. 2006 Dec 15;364(5):991-1002. Epub 2006 Sep 16. PMID:17046020
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (362 Kb) [Save to disk]
  • Biological Unit Coordinates (2iid.pdb1.gz) 180 Kb
  • Biological Unit Coordinates (2iid.pdb2.gz) 179 Kb
  • LPC: Ligand-Protein Contacts for 2IID
  • CSU: Contacts of Structural Units for 2IID
  • Likely Quarternary Molecular Structure file(s) for 2IID
  • Retrieve 2IID in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2IID from S2C, [Save to disk]
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  • Visual 3D analysis of 2IID
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2IID, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2iid_A] [2iid_D] [2iid_C] [2iid] [2iid_B]
  • SWISS-PROT database: [P81382]
  • Domain organization of [OXLA_AGKRH] by SWISSPFAM
  • Other resources with information on 2IID
  • Community annotation for 2IID at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
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