2ILT Oxidoreductase date Oct 03, 2006
title Human 11-Beta-Hydroxysteroid Dehydrogenase (Hsd1) With Nadp Adamantane Sulfone Inhibitor
authors K.L.Longenecker, B.Sorensen, R.Judge, W.Qin, J.T.Link
compound source
Molecule: Corticosteroid 11-Beta-Dehydrogenase Isozyme 1
Chain: A
Fragment: Dehydrogenase Domain (Residues 23-284)
Synonym: 11-Dh, 11-Beta-Hydroxysteroid Dehydrogenase 1, 11-
Ec: 1.1.1.146
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Hsd11b1
symmetry Space Group: I 2 3
R_factor 0.209 R_Free 0.275
crystal
cell
length a length b length c angle alpha angle beta angle gamma
123.871 123.871 123.871 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.30 Å
ligand NAP, NI, NN1 enzyme Oxidoreductase E.C.1.1.1.146 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceAdamantane sulfone and sulfonamide 11-beta-HSD1 Inhibitors., Sorensen B, Winn M, Rohde J, Shuai Q, Wang J, Fung S, Monzon K, Chiou W, Stolarik D, Imade H, Pan L, Deng X, Chovan L, Longenecker K, Judge R, Qin W, Brune M, Camp H, Frevert EU, Jacobson P, Link JT, Bioorg Med Chem Lett. 2007 Jan 15;17(2):527-32. Epub 2006 Oct 7. PMID:17070044
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (55 Kb) [Save to disk]
  • Biological Unit Coordinates (2ilt.pdb1.gz) 94 Kb
  • Biological Unit Coordinates (2ilt.pdb2.gz) 555 Kb
  • LPC: Ligand-Protein Contacts for 2ILT
  • CSU: Contacts of Structural Units for 2ILT
  • Likely Quarternary Molecular Structure file(s) for 2ILT
  • Structure Factors (114 Kb)
  • Retrieve 2ILT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2ILT from S2C, [Save to disk]
  • Re-refined 2ilt structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2ILT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2ILT
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2ILT, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ilt_A] [2ilt]
  • SWISS-PROT database: [P28845]
  • Domain organization of [DHI1_HUMAN] by SWISSPFAM
    • Other resources with information on 2ILT
  • Community annotation for 2ILT at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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