2ILU Oxidoreductase date Oct 03, 2006
title Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli Binary Complex With Nadph
authors L.Di Costanzo, G.Gomez, D.W.Christianson
compound source
Molecule: Aldehyde Dehydrogenase A
Chain: A
Synonym: Lactaldehyde Dehydrogenase, Glycolaldehyde Dehydro
Ec: 1.2.1.22, 1.2.1.21
Engineered: Yes
Organism_scientific: Escherichia Coli
Organism_taxid: 562
Gene: Alda
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 64 2 2
R_factor 0.212 R_Free 0.253
crystal
cell
length a length b length c angle alpha angle beta angle gamma
143.566 143.566 108.763 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.70 Å
ligand NDP, OCS, SO4 enzyme Oxidoreductase E.C.1.2.1.22 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of lactaldehyde dehydrogenase from Escherichia coli and inferences regarding substrate and cofactor specificity., Di Costanzo L, Gomez GA, Christianson DW, J Mol Biol. 2007 Feb 16;366(2):481-93. Epub 2006 Nov 10. PMID:17173928
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (80 Kb) [Save to disk]
  • Biological Unit Coordinates (2ilu.pdb1.gz) 294 Kb
  • LPC: Ligand-Protein Contacts for 2ILU
  • CSU: Contacts of Structural Units for 2ILU
  • Likely Quarternary Molecular Structure file(s) for 2ILU
  • Structure Factors (123 Kb)
  • Retrieve 2ILU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2ILU from S2C, [Save to disk]
  • Re-refined 2ilu structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2ILU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2ILU
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2ILU, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2ilu] [2ilu_A]
  • SWISS-PROT database: [P25553]
  • Domain organization of [ALDA_ECOLI] by SWISSPFAM
  • Other resources with information on 2ILU
  • Community annotation for 2ILU at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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