2IU1 Transcription date May 26, 2006
title Crystal Structure Of Eif5 C-Terminal Domain
authors C.Bieniossek, P.Schuetz, U.Baumann
compound source
Molecule: Eukaryotic Translation Initiation Factor 5
Chain: A
Fragment: C-Terminal Domain Residues 232-431
Synonym: Eif5
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_plasmid: Pet-22
symmetry Space Group: P 21 21 21
R_factor 0.185 R_Free 0.221
crystal
cell
length a length b length c angle alpha angle beta angle gamma
32.137 70.254 81.705 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.80 Å
note 2IU1 is a representative structure
Primary referenceThe crystal structure of the carboxy-terminal domain of human translation initiation factor eIF5., Bieniossek C, Schutz P, Bumann M, Limacher A, Uson I, Baumann U, J Mol Biol. 2006 Jul 7;360(2):457-65. Epub 2006 May 24. PMID:16781736
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (38 Kb) [Save to disk]
  • Biological Unit Coordinates (2iu1.pdb1.gz) 32 Kb
  • CSU: Contacts of Structural Units for 2IU1
  • Likely Quarternary Molecular Structure file(s) for 2IU1
  • Retrieve 2IU1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2IU1 from S2C, [Save to disk]
  • View 2IU1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2IU1
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2IU1, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2iu1] [2iu1_A]
  • SWISS-PROT database: [P55010]
  • Domain organization of [IF5_HUMAN] by SWISSPFAM
  • Domain found in 2IU1: [eIF5C ] by SMART
  • Other resources with information on 2IU1
  • Community annotation for 2IU1 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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