2IU3 Hydrolase date May 27, 2006
title Crystal Structures Of Transition State Analogue Inhibitors O Monophosphate Cyclohydrolase
authors L.Xu, Y.Chong, I.Hwang, A.D'Onofrio, K.Amore, G.P.Beardsley, C.Li, A.J.Olson, D.L.Boger, I.A.Wilson
compound source
Molecule: Bifunctional Purine Biosynthesis Protein Purh
Chain: A, B
Synonym: Aminoimidazole Carboxamide Ribonucleotide Transfor Imp Cyclohydrolase, Atic, Inosinicase, Imp Aicar Transformy Cyclohydrolase, Imp Synthetase;
Ec: 2.1.2.3, 3.5.4.10
Engineered: Yes
Other_details: Bifunctional Enzyme
Organism_scientific: Gallus Gallus
Organism_common: Chicken
Organism_taxid: 9031
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_vector: Pet
Expression_system_plasmid: Pet28a
symmetry Space Group: C 1 2 1
R_factor 0.215 R_Free 0.300
crystal
cell
length a length b length c angle alpha angle beta angle gamma
387.000 57.000 62.100 90.00 98.90 90.00
method X-Ray Diffractionresolution 2.90 Å
ligand 203, K enzyme Transferase E.C.2.1.2.3 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructure-based design, synthesis, evaluation, and crystal structures of transition state analogue inhibitors of inosine monophosphate cyclohydrolase., Xu L, Chong Y, Hwang I, D'Onofrio A, Amore K, Beardsley GP, Li C, Olson AJ, Boger DL, Wilson IA, J Biol Chem. 2007 Apr 27;282(17):13033-46. Epub 2007 Feb 26. PMID:17324932
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (186 Kb) [Save to disk]
  • Biological Unit Coordinates (2iu3.pdb1.gz) 180 Kb
  • LPC: Ligand-Protein Contacts for 2IU3
  • CSU: Contacts of Structural Units for 2IU3
  • Likely Quarternary Molecular Structure file(s) for 2IU3
  • Structure Factors (611 Kb)
  • Retrieve 2IU3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2IU3 from S2C, [Save to disk]
  • Re-refined 2iu3 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2IU3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2IU3
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2IU3, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2iu3_B] [2iu3] [2iu3_A]
  • SWISS-PROT database: [P31335]
  • Domain organization of [PUR9_CHICK] by SWISSPFAM
  • Domains found in 2IU3: [AICARFT_IMPCHas] [MGS ] by SMART
  • Other resources with information on 2IU3
  • Community annotation for 2IU3 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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