2IWA Transferase date Jun 27, 2006
title Unbound Glutaminyl Cyclotransferase From Carica Papaya.
authors T.Guevara, N.Mallorqui-Fernandez, R.Garcia-Castellanos, G.E.Pet C.Lauritzen, J.Pedersen, J.Arnau, F.X.Gomis-Ruth, M.Sola
compound source
Molecule: Glutamine Cyclotransferase
Chain: A
Ec: 2.3.2.5
Engineered: Yes
Other_details: Glycosylation At Asn53 And Asn123
Organism_scientific: Carica Papaya
Organism_common: Papaya
Organism_taxid: 3649
Expression_system: Trichoplusia Ni
Expression_system_common: Cabbage Looper
Expression_system_taxid: 7111
Expression_system_cell_line: High Five
Expression_system_vector_type: Baculovirus
symmetry Space Group: P 65
R_factor 0.148 R_Free 0.168
crystal
cell
length a length b length c angle alpha angle beta angle gamma
97.740 97.740 64.974 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.60 Å
ligand CA, GOL, NAG enzyme Transferase E.C.2.3.2.5 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referencePapaya glutamine cyclotransferase shows a singular five-fold beta-propeller architecture that suggests a novel reaction mechanism., Guevara T, Mallorqui-Fernandez N, Garcia-Castellanos R, Garcia-Pique S, Ebert Petersen G, Lauritzen C, Pedersen J, Arnau J, Gomis-Ruth FX, Sola M, Biol Chem. 2006 Oct-Nov;387(10-11):1479-86. PMID:17081122
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (56 Kb) [Save to disk]
  • Biological Unit Coordinates (2iwa.pdb1.gz) 50 Kb
  • LPC: Ligand-Protein Contacts for 2IWA
  • CSU: Contacts of Structural Units for 2IWA
  • Likely Quarternary Molecular Structure file(s) for 2IWA
  • Structure Factors (313 Kb)
  • Retrieve 2IWA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2IWA from S2C, [Save to disk]
  • Re-refined 2iwa structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2IWA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2IWA
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2IWA, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2iwa_A] [2iwa]
  • SWISS-PROT database: [O81226]
  • Domain organization of [O81226_CARPA] by SWISSPFAM
  • Other resources with information on 2IWA
  • Community annotation for 2IWA at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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