2IWZ Transferase date Jul 05, 2006
title Human Mitochondrial Beta-Ketoacyl Acp Synthase Complexed Wit Acid
authors C.E.Christensen, B.B.Kragelund, P.Von Wettstein-Knowles, A.Henr
compound source
Molecule: 3-Oxoacyl-[Acyl-Carrier-Protein] Synthase
Chain: A, B
Fragment: Residues 38-459
Synonym: Beta-Ketoacyl Synthase
Ec: 2.3.1.41
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli M15
Expression_system_taxid: 1007065
Expression_system_variant: Prep4
Expression_system_plasmid: Pqe30
Other_details: Sumio Sugano, University Of Tokyo Supplied D
symmetry Space Group: P 21 21 21
R_factor 0.155 R_Free 0.188
crystal
cell
length a length b length c angle alpha angle beta angle gamma
71.912 95.920 114.637 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.65 Å
ligand 6NA, NH4 enzyme Transferase E.C.2.3.1.41 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructure of the human beta-ketoacyl [ACP] synthase from the mitochondrial type II fatty acid synthase., Christensen CE, Kragelund BB, von Wettstein-Knowles P, Henriksen A, Protein Sci. 2007 Feb;16(2):261-72. PMID:17242430
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (148 Kb) [Save to disk]
  • Biological Unit Coordinates (2iwz.pdb1.gz) 142 Kb
  • LPC: Ligand-Protein Contacts for 2IWZ
  • CSU: Contacts of Structural Units for 2IWZ
  • Likely Quarternary Molecular Structure file(s) for 2IWZ
  • Structure Factors (1826 Kb)
  • Retrieve 2IWZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2IWZ from S2C, [Save to disk]
  • Re-refined 2iwz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2IWZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2IWZ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2IWZ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2iwz] [2iwz_A] [2iwz_B]
  • SWISS-PROT database: [Q9NWU1]
  • Domain organization of [OXSM_HUMAN] by SWISSPFAM
  • Other resources with information on 2IWZ
  • Community annotation for 2IWZ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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