2J5P Recombination date Sep 19, 2006
title E. Coli Ftsk Gamma Domain
authors V.Sivanathan, M.D.Allen, C.De Bekker, R.Baker, L.Arciszewska, S.M M.Bycroft, J.Lowe, D.J.Sherratt
compound source
Molecule: Dna Translocase Ftsk
Chain: A
Fragment: Gamma Domain, Residues 1261-1329
Synonym: E.Coli Ftsk
Engineered: Yes
 Organism_scientific: Escherichia Coli
Organism_taxid: 562
Expression_system: Escherichia Coli
Expression_system_taxid: 511693
Expression_system_strain: Bl21
methodSolution NMR
Primary referenceThe FtsK gamma domain directs oriented DNA translocation by interacting with KOPS., Sivanathan V, Allen MD, de Bekker C, Baker R, Arciszewska LK, Freund SM, Bycroft M, Lowe J, Sherratt DJ, Nat Struct Mol Biol. 2006 Nov;13(11):965-72. Epub 2006 Oct 22. PMID:17057717
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (366 Kb) [Save to disk]
  • Biological Unit Coordinates (2j5p.pdb1.gz) 19 Kb
  • CSU: Contacts of Structural Units for 2J5P
  • Original NMR restraints for 2J5P from PDB
  • Retrieve 2J5P in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2J5P from S2C, [Save to disk]
    • View 2J5P in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2J5P
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2J5P, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2j5p] [2j5p_A]
  • SWISS-PROT database: [P46889]
  • Belongs to the septal dna translocator (s-dna-t) family according to TCDB.
  • Domain organization of [FTSK_ECOLI] by SWISSPFAM
  • Domain found in 2J5P: [Ftsk_gamma ] by SMART
    • Other resources with information on 2J5P
  • Community annotation for 2J5P at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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