2J69 Hydrolase date Sep 26, 2006
title Bacterial Dynamin-Like Protein Bdlp
authors H.H.Low, J.Lowe
compound source
Molecule: Bacterial Dynamin-Like Protein
Chain: A, B, C, D
Engineered: Yes
 Organism_scientific: Nostoc Punctiforme
Organism_taxid: 272131
Atcc: 29133
Expression_system: Escherichia Coli
Expression_system_taxid: 511693
Expression_system_strain: Bl21
symmetry Space Group: C 1 2 1
R_factor 0.236 R_Free 0.281
crystal
cell
length a length b length c angle alpha angle beta angle gamma
214.289 218.596 151.198 90.00 134.81 90.00
method X-Ray Diffractionresolution 3.0 Å
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceA bacterial dynamin-like protein., Low HH, Lowe J, Nature. 2006 Dec 7;444(7120):766-9. Epub 2006 Nov 22. PMID:17122778
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (433 Kb) [Save to disk]
  • Biological Unit Coordinates (2j69.pdb1.gz) 110 Kb
  • Biological Unit Coordinates (2j69.pdb2.gz) 110 Kb
  • Biological Unit Coordinates (2j69.pdb3.gz) 110 Kb
  • Biological Unit Coordinates (2j69.pdb4.gz) 110 Kb
  • CSU: Contacts of Structural Units for 2J69
  • Likely Quarternary Molecular Structure file(s) for 2J69
  • Structure Factors (1374 Kb)
  • Retrieve 2J69 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2J69 from S2C, [Save to disk]
  • Re-refined 2j69 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2J69 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2J69
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2J69, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2j69] [2j69_C] [2j69_B] [2j69_D] [2j69_A]
  • SWISS-PROT database: [B2IZD3]
  • Domain organization of [B2IZD3_NOSP7] by SWISSPFAM
    • Other resources with information on 2J69
  • Community annotation for 2J69 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science