2J87	Transferase	date	Oct 23, 2006
title	Structure Of Vaccinia Virus Thymidine Kinase In Complex With Insights For Drug Design
authors	K.El Omari, N.Solaroli, A.Karlsson, J.Balzarini, D.K.Stammers
compound		source
Molecule: Thymidine Kinase Chain: A, B, C, D Synonym: Vaccinia Virus Thymidine Kinase Ec: 2.7.1.21 Engineered: Yes		Organism_scientific: Vaccinia Virus Organism_taxid: 10245 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 31	R_factor 0.257 R_Free 0.289
crystal cell	length a length b length c angle alpha angle beta angle gamma 63.331 63.331 166.412 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	3.10 Å
ligand	MG, TTP, ZN	enzyme	Transferase E.C.2.7.1.21 BRENDA
Gene Ontology	Chain Function Process Component A, D, C, B thymidine kinase activity
Primary reference	Structure of vaccinia virus thymidine kinase in complex with dTTP: insights for drug design., El Omari K, Solaroli N, Karlsson A, Balzarini J, Stammers DK, BMC Struct Biol. 2006 Oct 24;6:22. PMID:17062140

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (109 Kb) [Save to disk] Biological Unit Coordinates (2j87.pdb1.gz) 101 Kb LPC: Ligand-Protein Contacts for 2J87 CSU: Contacts of Structural Units for 2J87 Likely Quarternary Molecular Structure file(s) for 2J87 Structure Factors (184 Kb) Retrieve 2J87 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2J87 from S2C, [Save to disk] Re-refined 2j87 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

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Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2J87, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2j87_B] [2j87] [2j87_C] [2j87_D] [2j87_A] SWISS-PROT database: [O57203] Domain organization of [KITH_VACCA] by SWISSPFAM

Other resources with information on 2J87

Community annotation for 2J87 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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