2JC0	Hydrolase	date	Dec 18, 2006
title	Crystal Structure Of Hepatitis C Virus Polymerase In Complex With Inhibitor Sb655264
authors	A.Wonacott, T.Skarzynski, O.M.Singh
compound		source
Molecule: Rna-Dependent Rna-Polymerase Chain: A, B Fragment: Residues 1-570 Synonym: Hepatitis C Virus Rna Polymerase Engineered: Yes		Organism_scientific: Hepatitis C Virus Organism_taxid: 11103 Strain: Bk21 Variant: 1b Isolate Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 21 21 21	R_factor 0.181 R_Free 0.248
crystal cell	length a length b length c angle alpha angle beta angle gamma 85.740 105.893 126.120 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.2 Å
ligand	699 BindingDB	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	Optimization of novel acyl pyrrolidine inhibitors of hepatitis C virus RNA-dependent RNA polymerase leading to a development candidate., Slater MJ, Amphlett EM, Andrews DM, Bravi G, Burton G, Cheasty AG, Corfield JA, Ellis MR, Fenwick RH, Fernandes S, Guidetti R, Haigh D, Hartley CD, Howes PD, Jackson DL, Jarvest RL, Lovegrove VL, Medhurst KJ, Parry NR, Price H, Shah P, Singh OM, Stocker R, Thommes P, Wilkinson C, Wonacott A, J Med Chem. 2007 Mar 8;50(5):897-900. Epub 2007 Feb 2. PMID:17269759

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (195 Kb) [Save to disk] Biological Unit Coordinates (2jc0.pdb1.gz) 97 Kb Biological Unit Coordinates (2jc0.pdb2.gz) 97 Kb LPC: Ligand-Protein Contacts for 2JC0 CSU: Contacts of Structural Units for 2JC0 Likely Quarternary Molecular Structure file(s) for 2JC0 Structure Factors (595 Kb) Retrieve 2JC0 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2JC0 from S2C, [Save to disk] Re-refined 2jc0 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2JC0 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2JC0

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2JC0, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2jc0_B] [2jc0_A] [2jc0] SWISS-PROT database: [O39930] [P26663] Domain organization of [O39930_9HEPC] [POLG_HCVBK] by SWISSPFAM

Other resources with information on 2JC0

Community annotation for 2JC0 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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