2JEW Hydrolase date Jan 24, 2007
title Crystal Structure Of ((2s)-5-Amino-2-((1-N-Propyl-1h-Imidazo Methyl)Pentanoic Acid) Uk396,082 A Tafia Inhibitor, Bound T Activated Porcine Pancreatic Carboxypeptidaseb
authors D.G.Brown, R.S.Moore
compound source
Molecule: Carboxypeptidase B
Chain: A
Fragment: Catalytic Domain, Residues 111-416
Synonym: Activated Porcine Pancreatic Carboxypeptidase B
Ec: 3.4.17.2
Organism_scientific: Sus Scrofa
Organism_common: Pig
Organism_taxid: 9823
Tissue: Pancreatic
Other_details: Purchased
symmetry Space Group: P 41 21 2
R_factor 0.190 R_Free 0.210
crystal
cell
length a length b length c angle alpha angle beta angle gamma
84.090 84.090 92.820 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.40 Å
ligand 720, ZN BindingDB enzyme Hydrolase E.C.3.4.17.2 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceDiscovery of Potent & Selective Inhibitors of Activated Thrombin-Activatable Fibrinolysis Inhibitor for the Treatment of Thrombosis., Bunnage ME, Blagg J, Steele J, Owen DR, Allerton C, McElroy AB, Miller D, Ringer T, Butcher K, Beaumont K, Evans K, Gray AJ, Holland SJ, Feeder N, Moore RS, Brown DG, J Med Chem. 2007 Nov 9;. PMID:17990866
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (60 Kb) [Save to disk]
  • Biological Unit Coordinates (2jew.pdb1.gz) 55 Kb
  • LPC: Ligand-Protein Contacts for 2JEW
  • CSU: Contacts of Structural Units for 2JEW
  • Likely Quarternary Molecular Structure file(s) for 2JEW
  • Retrieve 2JEW in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2JEW from S2C, [Save to disk]
  • View 2JEW in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2JEW
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2JEW, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2jew] [2jew_A]
  • SWISS-PROT database: [P09955]
  • Domain organization of [CBPB1_PIG] by SWISSPFAM
  • Domain found in 2JEW: [Zn_pept ] by SMART
  • Other resources with information on 2JEW
  • Community annotation for 2JEW at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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