2JIZ Hydrolase date Jul 03, 2007
title The Structure Of F1-Atpase Inhibited By Resveratrol.
authors J.R.Gledhill, M.G.Montgomery, A.G.W.Leslie, J.E.Walker
compound source
Molecule: Atp Synthase Subunit Alpha Heart Isoform
Chain: A, B, C, H, I, J
Fragment: Residues 44-553
Synonym: Atp Synthase Alpha Chain Heart Isoform
Ec: 3.6.1.34
Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913
Organ: Heart

Molecule: Atp Synthase Subunit Beta
Chain: D, E, F, K, L, M
Fragment: Residues 47-528
Synonym: Atp Synthase Beta Chain
Ec: 3.6.1.34

Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913
Organ: Heart

Molecule: Atp Synthase Gamma Chain
Chain: G, N
Fragment: Residues 26-297
Ec: 3.6.1.34

Organism_scientific: Bos Taurus
Organism_common: Bovine
Organism_taxid: 9913
Organ: Heart
symmetry Space Group: P 1 21 1
R_factor 0.160 R_Free 0.217
crystal
cell
length a length b length c angle alpha angle beta angle gamma
106.776 277.368 137.827 90.00 90.19 90.00
method X-Ray Diffractionresolution 2.30 Å
ligand ADP, ANP, AZI, GOL, MG, PO4, STL enzyme Hydrolase E.C.3.6.1.34 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, J, B, H, C, I


F, K, E, M, D, L


N, G


Primary referenceMechanism of inhibition of bovine F1-ATPase by resveratrol and related polyphenols., Gledhill JR, Montgomery MG, Leslie AG, Walker JE, Proc Natl Acad Sci U S A. 2007 Aug 21;104(34):13632-7. Epub 2007 Aug 13. PMID:17698806
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1017 Kb) [Save to disk]
  • Biological Unit Coordinates (2jiz.pdb1.gz) 503 Kb
  • Biological Unit Coordinates (2jiz.pdb2.gz) 509 Kb
  • LPC: Ligand-Protein Contacts for 2JIZ
  • CSU: Contacts of Structural Units for 2JIZ
  • Likely Quarternary Molecular Structure file(s) for 2JIZ
  • Structure Factors (2658 Kb)
  • Retrieve 2JIZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2JIZ from S2C, [Save to disk]
  • Re-refined 2jiz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2JIZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2JIZ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2JIZ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2jiz_G] [2jiz_B] [2jiz_N] [2jiz_M] [2jiz] [2jiz_D] [2jiz_H] [2jiz_K] [2jiz_J] [2jiz_I] [2jiz_F] [2jiz_A] [2jiz_C] [2jiz_L] [2jiz_E]
  • SWISS-PROT database: [P19483] [P00829] [P05631]
  • Domain organization of [ATPA_BOVIN] [ATPB_BOVIN] [ATPG_BOVIN] by SWISSPFAM
  • Domain found in 2JIZ: [AAA ] by SMART
  • Other resources with information on 2JIZ
  • Community annotation for 2JIZ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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