2JLN Membrane Protein date Sep 11, 2008
title Structure Of Mhp1, A Nucleobase-Cation-Symport-1 Family Transporter
authors S.Weyand, T.Shimamura, S.Yajima, S.Suzuki, O.Mirza, K.Krusong, E.P.Carpenter, N.G.Rutherford, J.M.Hadden, J.O'Reilly, P.Ma, M.Saidijam, S.G.Patching, R.J.Hope, H.T.Norbertczak, P.C.J.Roach, S.Iwata, P.J.F.Henderson, A.D.Cameron
compound source
Molecule: Mhp1
Chain: A
Engineered: Yes
Organism_scientific: Microbacterium Liquefaciens
Organism_taxid: 33918
Strain: Aj3912
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Blr
Expression_system_plasmid: Pshp11
symmetry Space Group: P 21 21 21
R_factor 0.2338 R_Free 0.2809
crystal
cell
length a length b length c angle alpha angle beta angle gamma
79.700 109.140 113.820 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.85 Å
ligand HG, NA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure and Molecular Mechanism of a Nucleobase-Cation-Symport-1 Family Transporter., Weyand S, Shimamura T, Yajima S, Suzuki S, Mirza O, Krusong K, Carpenter EP, Rutherford NG, Hadden JM, O'Reilly J, Ma P, Saidijam M, Patching SG, Hope RJ, Norbertczak HT, Roach PC, Iwata S, Henderson PJ, Cameron AD, Science. 2008 Oct 16. PMID:18927357
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (77 Kb) [Save to disk]
  • Biological Unit Coordinates (2jln.pdb1.gz) 73 Kb
  • LPC: Ligand-Protein Contacts for 2JLN
  • CSU: Contacts of Structural Units for 2JLN
  • Likely Quarternary Molecular Structure file(s) for 2JLN
  • Structure Factors (167 Kb)
  • Retrieve 2JLN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2JLN from S2C, [Save to disk]
  • Re-refined 2jln structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 2JLN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2JLN
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2JLN, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2jln_A] [2jln]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 2JLN
  • Community annotation for 2JLN at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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