2JMY Antimicrobial Protein date Dec 13, 2006
title Solution Structure Of Cm15 In Dpc Micelles
authors M.Respondek, T.Madl, C.Goebl, R.Golser, K.Zangger
compound source
Molecule: Cm15
Chain: A
Engineered: Yes
Synthetic: Yes
Organism_scientific: Synthetic Construct
Organism_taxid: 32630
Other_details: Designed Hybrid Peptide; No Natural Source
methodSolution NMR
Primary referenceMapping the orientation of helices in micelle-bound peptides by paramagnetic relaxation waves., Respondek M, Madl T, Gobl C, Golser R, Zangger K, J Am Chem Soc. 2007 Apr 25;129(16):5228-34. Epub 2007 Mar 31. PMID:17397158
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (65 Kb) [Save to disk]
  • Biological Unit Coordinates (2jmy.pdb1.gz) 5 Kb
  • CSU: Contacts of Structural Units for 2JMY
  • Original NMR restraints for 2JMY from PDB
  • Retrieve 2JMY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2JMY from S2C, [Save to disk]
  • View 2JMY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2JMY
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2JMY, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2jmy] [2jmy_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 2JMY
  • Community annotation for 2JMY at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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