2JOC Ligase date Mar 06, 2007
title Mouse Itch 3rd Domain Phosphorylated In T30
authors M.J.Macias, A.Z.Shaw, P.Martin-Malpartida, B.Morales, L.Ruiz, X.R Espain, F.Yraola, M.Royo
compound source
Molecule: Itchy E3 Ubiquitin Protein Ligase
Chain: A
Fragment: Ww 3 Domain, Sequence Database Residues 399-432
Ec: 6.3.2.-
Engineered: Yes
 Synthetic: Yes
Other_details: The Peptide Was Chemically Synthesized. The Of The Peptide Is Naturally Found In Mus Musculus (Mouse).
methodSolution NMR
ligand TPO enzyme Ligase E.C.6.3.2 BRENDA
Primary referenceNMR structural studies of the ItchWW3 domain reveal that phosphorylation at T30 inhibits the interaction with PPxY-containing ligands., Morales B, Ramirez-Espain X, Shaw AZ, Martin-Malpartida P, Yraola F, Sanchez-Tillo E, Farrera C, Celada A, Royo M, Macias MJ, Structure. 2007 Apr;15(4):473-83. PMID:17437719
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (70 Kb) [Save to disk]
  • Biological Unit Coordinates (2joc.pdb1.gz) 10 Kb
  • LPC: Ligand-Protein Contacts for 2JOC
  • CSU: Contacts of Structural Units for 2JOC
  • Original NMR restraints for 2JOC from PDB
  • Retrieve 2JOC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2JOC from S2C, [Save to disk]
    • View 2JOC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2JOC
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2JOC, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2joc_A] [2joc]
  • SWISS-PROT database: [Q8C863]
  • Domain organization of [ITCH_MOUSE] by SWISSPFAM
  • Domain found in 2JOC: [WW ] by SMART
    • Other resources with information on 2JOC
  • Community annotation for 2JOC at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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