2JP9	Transcription Dna	date	Apr 30, 2007
title	Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Bound To Dna
authors	R.Stoll, B.M.Lee, E.W.Debler, J.H.Laity, I.A.Wilson, H.J.Dyson, P.
compound		source
Molecule: Dna (5'- D(Pdcpdgpdcpdgpdgpdgpdgpdgpdcpdgpdtpdcpdtpdgp C)-3'); Chain: B Engineered: Yes		Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630
Molecule: Dna (5'- D(Pdgpdcpdgpdcpdapdgpdapdcpdgpdcpdcpdcpdcpdcp G)-3'); Chain: C Engineered: Yes		Synthetic: Yes Organism_scientific: Synthetic Construct Organism_taxid: 32630
Molecule: Wilms Tumor 1 Chain: A Fragment: Residues 174-291 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Gene: Wt1 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid Expression_system_vector: Pet21d
method	Solution NMR
ligand	ZN	enzyme
Primary reference	Structure of the wilms tumor suppressor protein zinc finger domain bound to DNA., Stoll R, Lee BM, Debler EW, Laity JH, Wilson IA, Dyson HJ, Wright PE, J Mol Biol. 2007 Oct 5;372(5):1227-45. Epub 2007 Jul 21. PMID:17716689

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1001 Kb) [Save to disk] Biological Unit Coordinates (2jp9.pdb1.gz) 51 Kb LPC: Ligand-Protein Contacts for 2JP9 CSU: Contacts of Structural Units for 2JP9 Original NMR restraints for 2JP9 from PDB Retrieve 2JP9 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2JP9 from S2C, [Save to disk]

View 2JP9 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2JP9

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2JP9, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2jp9_A] [2jp9] [2jp9_B] [2jp9_C] SWISS-PROT database: [P19544] Domain organization of [WT1_HUMAN] by SWISSPFAM Domain found in 2JP9: [ZnF_C2H2 ] by SMART

Other resources with information on 2JP9

Community annotation for 2JP9 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---