2JPN Hydrolase date May 17, 2007
title Solution Structure Of T4 Bacteriophage Helicase Uvsw.1
authors S.G.Sivakolundu, T.Lee, S.W.White, R.W.Kriwacki
compound source
Molecule: Atp-Dependent Dna Helicase Uvsw
Chain: A
Fragment: Sequence Database Residues, 512-587
Synonym: Dar Protein
Ec: 3.6.1.-
Engineered: Yes
 Organism_scientific: Enterobacteria Phage T4
Organism_taxid: 10665
Gene: Uvsw, Dar
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Vector
Expression_system_vector: Pet15b
methodSolution NMR
ligand
enzyme Hydrolase E.C.3.6.1 BRENDA
Primary referenceCrystallographic and NMR analyses of UvsW and UvsW.1 from bacteriophage T4., Kerr ID, Sivakolundu S, Li Z, Buchsbaum JC, Knox LA, Kriwacki RW, White SW, J Biol Chem. 2007 Sep 17;. PMID:17878153
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (403 Kb) [Save to disk]
  • Biological Unit Coordinates (2jpn.pdb1.gz) 21 Kb
  • CSU: Contacts of Structural Units for 2JPN
  • Original NMR restraints for 2JPN from PDB
  • Retrieve 2JPN in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2JPN from S2C, [Save to disk]
    • View 2JPN in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2JPN
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2JPN, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2jpn_A] [2jpn]
  • SWISS-PROT database: [P20703]
  • Domain organization of [UVSW_BPT4] by SWISSPFAM
    • Other resources with information on 2JPN
  • Community annotation for 2JPN at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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