2JQ3 Lipid Binding Protein date May 28, 2007
title Structure And Dynamics Of Human Apolipoprotein C-III
authors C.S.Gangabadage, J.Zdunek, M.Tessari, S.Nilsson, G.Olivecrona, S.
compound source
Molecule: Apolipoprotein C-III
Chain: A
Synonym: Apo-Ciii, Apoc-III
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Apoc3
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Vector
Expression_system_vector: Pet23b
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A
  • cholesterol efflux
  • high-density lipoprotein par...
  • negative regulation of lipop...

  • Primary referenceStructure and Dynamics of Human Apolipoprotein CIII., Gangabadage CS, Zdunek J, Tessari M, Nilsson S, Olivecrona G, Wijmenga SS, J Biol Chem. 2008 Jun 20;283(25):17416-27. Epub 2008 Apr 11. PMID:18408013
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (201 Kb) [Save to disk]
  • Biological Unit Coordinates (2jq3.pdb1.gz) 20 Kb
  • CSU: Contacts of Structural Units for 2JQ3
  • Original NMR restraints for 2JQ3 from PDB
  • Retrieve 2JQ3 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2JQ3 from S2C, [Save to disk]
  • View 2JQ3 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2JQ3
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2JQ3, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2jq3_A] [2jq3]
  • SWISS-PROT database: [P02656]
  • Domain organization of [APOC3_HUMAN] by SWISSPFAM
  • Other resources with information on 2JQ3
  • Community annotation for 2JQ3 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
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