2JRD Viral Protein date Jun 25, 2007
title Influenza Hemagglutinin Fusion Domain Mutant F9a
authors A.L.Lai, L.K.Tamm
compound source
Molecule: Hemagglutinin
Chain: A
Engineered: Yes
 Organism_scientific: Influenza A Virus
Organism_taxid: 11320
Gene: Ha
methodSolution NMR
Primary referenceLocking the kink in the influenza hemagglutinin fusion domain structure., Lai AL, Tamm LK, J Biol Chem. 2007 Aug 17;282(33):23946-56. Epub 2007 Jun 12. PMID:17567572
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (94 Kb) [Save to disk]
  • Biological Unit Coordinates (2jrd.pdb1.gz) 4 Kb
  • CSU: Contacts of Structural Units for 2JRD
  • Original NMR restraints for 2JRD from PDB
  • Retrieve 2JRD in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2JRD from S2C, [Save to disk]
    • View 2JRD in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2JRD
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2JRD, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2jrd] [2jrd_A]
  • SWISS-PROT database: [P11134]
  • Domain organization of [HEMA_I82A4] by SWISSPFAM
    • Other resources with information on 2JRD
  • Community annotation for 2JRD at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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