2JT2 Hydrolase date Jul 18, 2007
title Solution Structure Of The Aquifex Aeolicus Lpxc- Chir-090 Co
authors A.W.Barb, L.Jiang, C.R.H.Raetz, P.Zhou
compound source
Molecule: Udp-3-O-[3-Hydroxymyristoyl] N-Acetylglucosamine Deacetylase;
Chain: A
Synonym: Udp-3-O-Acyl-Glcnac Deacetylase
Ec: 3.5.1.-
Engineered: Yes
Mutation: Yes
Organism_scientific: Aquifex Aeolicus
Organism_taxid: 63363
Gene: Lpxc, Enva
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Vector
Expression_system_vector: Pet21a
methodSolution NMR
ligand C90, ZN enzyme Hydrolase E.C.3.5.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructure of the deacetylase LpxC bound to the antibiotic CHIR-090: Time-dependent inhibition and specificity in ligand binding., Barb AW, Jiang L, Raetz CR, Zhou P, Proc Natl Acad Sci U S A. 2007 Nov 20;104(47):18433-8. Epub 2007 Nov 19. PMID:18025458
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1841 Kb) [Save to disk]
  • Biological Unit Coordinates (2jt2.pdb1.gz) 73 Kb
  • LPC: Ligand-Protein Contacts for 2JT2
  • CSU: Contacts of Structural Units for 2JT2
  • Original NMR restraints for 2JT2 from PDB
  • Retrieve 2JT2 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2JT2 from S2C, [Save to disk]
  • View 2JT2 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2JT2
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2JT2, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2jt2] [2jt2_A]
  • SWISS-PROT database: [O67648]
  • Domain organization of [LPXC_AQUAE] by SWISSPFAM
  • Other resources with information on 2JT2
  • Community annotation for 2JT2 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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