2JT4 Signaling Protein date Jul 18, 2007
title Solution Structure Of The Sla1 Sh3-3-Ubiquitin Complex
authors Y.He, I.Radhakrishnan
compound source
Molecule: Cytoskeleton Assembly Control Protein Sla1
Chain: A
Engineered: Yes
Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Organism_taxid: 4932
Gene: Sla1
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Vector
Expression_system_vector: Pet30

Molecule: Ubiquitin
Chain: B
Fragment: Sh3 Domain Sequence Database Residues 350-420
Engineered: Yes

Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Organism_taxid: 4932
Gene: Ubi1, Rpl40a
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Vector
Expression_system_vector: Pet3a
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural Basis for Ubiquitin Recognition by SH3 Domains., He Y, Hicke L, Radhakrishnan I, J Mol Biol. 2007 Oct 12;373(1):190-6. Epub 2007 Aug 17. PMID:17765920
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (796 Kb) [Save to disk]
  • Biological Unit Coordinates (2jt4.pdb1.gz) 39 Kb
  • CSU: Contacts of Structural Units for 2JT4
  • Original NMR restraints for 2JT4 from PDB
  • Retrieve 2JT4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2JT4 from S2C, [Save to disk]
  • View 2JT4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2JT4
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2JT4, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2jt4_B] [2jt4] [2jt4_A]
  • SWISS-PROT database: [P32790] [P61864]
  • Domain organization of [SLA1_YEAST] [UBIQ_YEAST] by SWISSPFAM
  • Domains found in 2JT4: [SH3] [UBQ ] by SMART
  • Other resources with information on 2JT4
  • Community annotation for 2JT4 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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