2JYL Viral Protein date Dec 14, 2007
title Solution Structure Of A Double Mutant Of The Carboxy-Termina Dimerization Domain Of The Hiv-1 Capsid Protein
authors H.C.Wong, R.Shin, N.R.Krishna
compound source
Molecule: Capsid Protein P24 (Ca)
Chain: A
Engineered: Yes
Mutation: Yes
 Organism_scientific: Human Immunodeficiency Virus 1
Organism_taxid: 11676
Gene: Gag-Pol
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet15b
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSolution Structure of a Double Mutant of the Carboxy-Terminal Dimerization Domain of the HIV-1 Capsid Protein(,)., Wong HC, Shin R, Krishna NR, Biochemistry. 2008 Jan 26;. PMID:18220423
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (25 Kb) [Save to disk]
  • Biological Unit Coordinates (2jyl.pdb1.gz) 22 Kb
  • CSU: Contacts of Structural Units for 2JYL
  • Original NMR restraints for 2JYL from PDB
  • Retrieve 2JYL in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2JYL from S2C, [Save to disk]
    • View 2JYL in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2JYL
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2JYL, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2jyl_A] [2jyl]
  • SWISS-PROT database: [P12497]
  • Domain organization of [POL_HV1N5] by SWISSPFAM
    • Other resources with information on 2JYL
  • Community annotation for 2JYL at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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