2K06 Transcription date Jan 25, 2008
title Solution Structure Of The Aminoterminal Domain Of E. Coli Nu
authors K.Schweimer, U.Scheckenhofer, P.Roesch
compound source
Molecule: Transcription Antitermination Protein Nusg
Chain: A
Fragment: N-Terminal Domain, Residues 1-123
Engineered: Yes
 Organism_scientific: Escherichia Coli
Gene: Nusg
Expression_system: Escherichia Coli
Expression_system_strain: Bl21(De3)
Expression_system_vector: Pet11a
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceTwo structurally independent domains of E. coli NusG create regulatory plasticity via distinct interactions with RNA polymerase and regulators., Mooney RA, Schweimer K, Rosch P, Gottesman M, Landick R, J Mol Biol. 2009 Aug 14;391(2):341-58. Epub 2009 Jun 3. PMID:19500594
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (677 Kb) [Save to disk]
  • Biological Unit Coordinates (2k06.pdb1.gz) 34 Kb
  • CSU: Contacts of Structural Units for 2K06
  • Original NMR restraints for 2K06 from PDB
  • Retrieve 2K06 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2K06 from S2C, [Save to disk]
    • View 2K06 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2K06
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2K06, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2k06] [2k06_A]
  • SWISS-PROT database: [P0AFG0]
  • Domain organization of [NUSG_ECOLI] by SWISSPFAM
  • Domain found in 2K06: [NGN ] by SMART
    • Other resources with information on 2K06
  • Community annotation for 2K06 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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