2K0L Membrane Protein date Feb 04, 2008
title Nmr Structure Of The Transmembrane Domain Of The Outer Membr Protein A From Klebsiella Pneumoniae In Dhpc Micelles.
authors M.Renault, O.Saurel, V.Gervais, F.Lohr, V.Reat, M.Piotto, A.Milon
compound source
Molecule: Outer Membrane Protein A
Chain: A
Fragment: Transmembrane Domain
Synonym: Outer Membrane Protein II
Engineered: Yes
Other_details: @
 Organism_scientific: Klebsiella Pneumoniae
Organism_taxid: 573
Strain: Rv 308
Gene: Ompa
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21de3
Expression_system_vector: Pet21c-Kpompa
Other_details: Protein Expressed In Inclusion Bodies.
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSolution State NMR Structure and Dynamics of KpOmpA, a 210 Residue Transmembrane Domain Possessing a High Potential for Immunological Applications., Renault M, Saurel O, Czaplicki J, Demange P, Gervais V, Lohr F, Reat V, Piotto M, Milon A, J Mol Biol. 2008 Oct 15. PMID:18952100
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1042 Kb) [Save to disk]
  • Biological Unit Coordinates (2k0l.pdb1.gz) 51 Kb
  • CSU: Contacts of Structural Units for 2K0L
  • Original NMR restraints for 2K0L from PDB
  • Retrieve 2K0L in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2K0L from S2C, [Save to disk]
    • View 2K0L in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2K0L
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2K0L, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2k0l] [2k0l_A]
  • SWISS-PROT database: [P24017]
  • Belongs to the ompa-ompf porin (oop) family according to TCDB.
  • Domain organization of [OMPA_KLEPN] by SWISSPFAM
    • Other resources with information on 2K0L
  • Community annotation for 2K0L at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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