2K10 Antimicrobial Protein date Feb 19, 2008
title Confirmational Analysis Of The Broad-Spectrum Antibacterial Rantuerin-2csa: Identification Of A Full Length Helix-Turn- Motif
authors C.M.Hewage, A.P.Subasinghage, M.Conlon
compound source
Molecule: Ranatuerin-2csa
Chain: A
Engineered: Yes
 Synthetic: Yes
Organism_scientific: Rana Cascadae
Organism_common: Frogs & Toads
Organism_taxid: 160497
methodSolution NMR
note 2K10 is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceConformational analysis of the broad-spectrum antibacterial peptide, ranatuerin-2CSa: Identification of a full length helix-turn-helix motif., Subasinghage AP, Conlon JM, Hewage CM, Biochim Biophys Acta. 2008 Jun;1784(6):924-9. Epub 2008 Mar 14. PMID:18387372
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (161 Kb) [Save to disk]
  • Biological Unit Coordinates (2k10.pdb1.gz) 8 Kb
  • CSU: Contacts of Structural Units for 2K10
  • Original NMR restraints for 2K10 from PDB
  • Retrieve 2K10 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2K10 from S2C, [Save to disk]
    • View 2K10 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2K10
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2K10, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2k10_A] [2k10]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 2K10
  • Community annotation for 2K10 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science