2K6P Unknown Function date Jul 15, 2008
title Solution Structure Of Hypothetical Protein, Hp1423
authors J.Kim, S.Park, K.Lee, W.Son, N.Sohn, B.Lee
compound source
Molecule: Uncharacterized Protein Hp_1423
Chain: A
Engineered: Yes
 Organism_scientific: Helicobacter Pylori
Organism_common: Campylobacter Pylori
Organism_taxid: 210
Gene: Hp_1423
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet21a
methodSolution NMR
note 2K6P is a representative structure
Gene HP
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSolution structure of hypothetical protein HP1423 (Y1423_HELPY) reveals the presence of alphaL motif related to RNA binding., Kim JH, Park SJ, Lee KY, Son WS, Sohn NY, Kwon AR, Lee BJ, Proteins. 2009 Apr;75(1):252-7. PMID:19137609
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (453 Kb) [Save to disk]
  • Biological Unit Coordinates (2k6p.pdb1.gz) 22 Kb
  • CSU: Contacts of Structural Units for 2K6P
  • Original NMR restraints for 2K6P from PDB
  • Retrieve 2K6P in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2K6P from S2C, [Save to disk]
    • View 2K6P in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2K6P
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2K6P, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2k6p] [2k6p_A]
  • SWISS-PROT database: [O25966]
  • Domain organization of [Y1423_HELPY] by SWISSPFAM
  • Domain found in 2K6P: [S4 ] by SMART
    • Other resources with information on 2K6P
  • Community annotation for 2K6P at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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