2K7O Metal Binding Protein date Aug 17, 2008
title Ca2+-S100b, Refined With Rdcs
authors N.T.Wright, K.G.Inman, J.A.Levine, D.J.Weber
compound source
Molecule: Protein S100-B
Chain: A, B
Synonym: S100 Calcium-Binding Protein B, S-100 Protein Subu S-100 Protein Beta Chain;
Engineered: Yes
 Organism_scientific: Rattus Norvegicus
Organism_common: Rat
Organism_taxid: 10116
Gene: S100b
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_vector: Pet 11a
methodSolution NMR
ligand CA enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceRefinement of the solution structure and dynamic properties of Ca(2+)-bound rat S100B., Wright NT, Inman KG, Levine JA, Cannon BR, Varney KM, Weber DJ, J Biomol NMR. 2008 Dec;42(4):279-86. Epub 2008 Oct 24. PMID:18949447
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (976 Kb) [Save to disk]
  • Biological Unit Coordinates (2k7o.pdb1.gz) 48 Kb
  • LPC: Ligand-Protein Contacts for 2K7O
  • CSU: Contacts of Structural Units for 2K7O
  • Original NMR restraints for 2K7O from PDB
  • Retrieve 2K7O in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2K7O from S2C, [Save to disk]
    • View 2K7O in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2K7O
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2K7O, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2k7o_B] [2k7o_A] [2k7o]
  • SWISS-PROT database: [P04631]
  • Domain organization of [S100B_RAT] by SWISSPFAM
  • Domain found in 2K7O: [S_100 ] by SMART
    • Other resources with information on 2K7O
  • Community annotation for 2K7O at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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